（１）京都大学研究生院工学研究科硕士课程
① 科目的选修
学生须修完总学分达到30学分的课程。下表是城市环境工程专业的课程表。从表中选修20个学分，其中必修科目达到8个学分以上（On the Research Training (ORT)科目，包括必修的Environmental Engineering Seminar A＆B在内）。清华大学深圳国际研究生院的科目中最多可以取得10个学分。
| 科目名 | 上半 学期 |
下半 学期 |
Major | ORT | |
|
基础科目 |
Environmental Risk | 2 | 〇 | ||
| Urban Metabolism Engineering | 2 | 〇 | |||
| Systems Approach on Sound Material Cycles Society | 2 | 〇 | |||
| Water Quality Control Engineering | 2 | 〇 | |||
| Water Sanitary Engineering | 2 | 〇 | |||
| Nuclear Environmental Engineering, Adv. | 2 | 〇 | |||
| Atmospheric and Global Environmental Engineering, Adv. | 2 | 〇 | |||
|
发展应用科目 |
Environmental Engineering Seminar A | 4 | ◎ | ||
| Environmental Engineering Seminar B | 4 | ◎ | |||
| Environmental Microbiology, Adv. | 2 | 〇 | |||
| Environmental Health, Adv. | 2 | 〇 | |||
| Environmental-friendly Technology for Sound Material Cycle(*) | 1.5 | 〇 | |||
| Geohydro Environment Engineering, Adv. | 2 | 〇 | |||
| Lecture on Environmental Risk Management Leader | 2 | ||||
| New Environmental Engineering I, Adv. | 2 | ||||
| New Environmental Engineering II, Adv. | 2 | ||||
| Environmental Organic Micropollutants Analysis Lab. | 2 | 〇 | |||
| Advanced Environmental Engineering Lab. | 2 | 〇 | |||
※ ◎表示必修科目
※ (*)表示隔年
※ 红色表示英文授课
② 硕士论文
硕士论文要求以日文或英文撰写，必须按照京都大学工学研究科城市环境工程课程指定的论文格式。若以日文撰写，英文摘要不得多于10页A4纸，且论文答辩必须以英文进行口头发表(公听会)，合格后准予通过。
（２）清华大学深圳国际研究生院硕士课程
① 科目的选修
学生须修完总学分达到32学分的课程。下表是资源和环境（简称环境工程）专业科目的其中之一。从中选修32个学分，其中Public必修科目须选修5个学分，Subjective专业科目18个学分以上，Vocational职业发展科目4个学分以上，包括实习在内的Practice实践科目的5个学分。京都大学工学研究科城市环境工程专业的科目中最多可以取得10个学分（类似的科目除外）。
| 科目名 | 上半 学期 |
下半 学期 |
|
| Public 公共科目 |
A Panoramic View of Chinese Culture | 2 | |
| Interpretation of Frontier Issues of China’s Economy | 1 | ||
| Chinese language | 2 | ||
| Subjective 专业科目 |
Principles of Environmental Behavior | 2 | |
| Advanced Environmental Chemistry | 2 | ||
| Membrane Science and Technology- | 2 | ||
| Sustainable Nanotechnology: Environmental Applications and Implications | 3 | ||
| Environmental Monitoring and Analysis | 3 | ||
| Air Pollution Control Technology | 3 | ||
| Management and Treatment of Solid Waste | 3 | ||
| Fundamentals and Application of Environmental Biotechnology | 3 | ||
| Technology for Wastewater Treatment and Reuse | 3 | ||
| Drinking Water Treatment Technology | 3 | ||
| Vocational 职业科目 |
Literature Review and Thesis Writing | 1 | |
| Professional Ethics | 1 | ||
| Frontiers of Chinese Contemporary Issues Research | 1 | ||
| Management of Entrepreneurship | 2 | ||
| Professional Development and Presentation | 2 | ||
| Practice 实践科目 |
Internship | 3 | |
| Literature Review and Research Proposal | 1 | ||
| Academic activities | 1 |
※ 红色表示包含中文的授课
※ 具体科目和开课时间每年可能会有所变化。
② 硕士论文
硕士论文要求以英文撰写，必须按照清华大学深圳国际研究生院环境工程项目指定的论文格式。另外，论文答辩必须以英语进行口头发表(公听会)，合格后准予通过。
